ncRNA ID | lus-miR169a |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - UAGCCAAGGAUGACUUGCCCA - NA |
Stem-loop(if miRNA) |
     -C       U      A      G        -UG           U    U     C  -UU     --------C   U AGGAC  AGGGUGU ACAUGA AGAUCA AACUUGUU   GUAGCCAAGGA GACU GCCCA AU   CUCUG         UGC A |||||  ||||||| |||||| |||||| ||||||||   ||||||||||| |||| ||||| ||   |||||         ||| G UCUUG  UCCCGUA UGUACU UCUAGU UUGGACAG   UAUUGGUUCCU CUGA CGGGU UG   GAGAC         ACG C      UU       U      C      A        UCG           -    -     C  UUU     AUUCAUUCU   U |
Stem-loop sequence | AGGACCAGGGUGUUACAUGAAAGAUCAGAACUUGUUUGGUAGCCAAGGAUGACUUGCCCACAUUUCUCUGCUGCUAGCUGCAUCUUACUUACAGAGUUUGUCUGGGCAGUCUCCUUGGUUAUGCUGACAGGUUAUGAUCUCUCAUGUUAUGCCCUUUGUUCU |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |