| ncRNA ID | novel_vvi_miR63 |
| Species | Vitis vinifera |
| Class | miRNA |
| Genome position | Chr6:463202-463414 [+] |
| Reference genome | 12X |
| Source | SRR1049296 |
| Length | 24 |
| Mature sequence(if miRNA) | 190 - CUAUUCAGUUAAAAAACAAACACC - 213 |
| Stem-loop(if miRNA) |
-- A A A GU AA A U U AUU A UGUUU UUUUUUGACU AAUA AAAAA CAAAAUAUUUGGUUUUUUCUAUUAA UAAAAGUAAUUU UUGACAUCGUUCAAUAUAACU AA UGAAC UUG U ||||| |||||||||| |||| ||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| || ||||| ||| ACAAA AAAAAAUUGA UUAU UUUUU GUUUUAUAAAUCAAAAAAGAUAAUU AUUUUCGUUGGA AACUGUAGCAAGUUAUAUUGA UU ACUUG AAC A CC C C C UG CA C U C --- A |
| Stem-loop sequence | UGUUUAUUUUUUGACUAAAUAAAAAAAGUCAAAAUAUUUGGUUUUUUCUAUUAAAAUAAAAGUAAUUUAUUGACAUCGUUCAAUAUAACUUAAUUGAACAUUUUGAUAACAAGUUCACUUUAGUUAUAUUGAACGAUGUCAACAGGUUGCUUUUAACUUAAUAGAAAAAACUAAAUAUUUUGGUUUUUUCUAUUCAGUUAAAAAACAAACACC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_002275318.4 |
|
1.5 | PREDICTED: Vitis vinifera tRNA pseudouridine synthase A (LOC100242086), mRNA | NA | coding protein | psRNATarget |