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BaseInfo

ncRNA ID novel_vvi_miR59
Species Vitis vinifera
Class miRNA
Genome position Chr6:14286895-14287003 [-]
Reference genome 12X
Source SRR1049296
Length 24
Mature sequence(if miRNA) 1 - AGACACUUUUAGUAUAAAUUCAAU - 24
Stem-loop(if miRNA) --UA    A               -C UG     AAU      AA     A    AU
    AAUU AUACUAAAAGUGUCU  U  AAGGA   UAUUUU  UAUAA UUUA  U
    |||| |||||||||||||||  |  |||||   ||||||  ||||| ||||
    UUAA UAUGAUUUUCACAGA  A  UUUCU   GUGGAA  GUAUU AAGU  U
UAAC    A               AA GU     ---      -G     A    AU
Stem-loop sequence UAAAUUAAUACUAAAAGUGUCUCUUGAAGGAAAUUAUUUUAAUAUAAAUUUAAUUUUAUGAAAUUAUGGAAGGUGUCUUUUGAAAAGACACUUUUAGUAUAAAUUCAAU