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BaseInfo

ncRNA ID novel_vvi_miR52
Species Vitis vinifera
Class miRNA
Genome position Chr5:6820742-6820806 [-]
Reference genome 12X
Source SRR1049296;SRR1048203;SRR1049370;SRR1049371;SRR1049372;SRR1049373;SRR1528352;SRR1528353;SRR1528356;SRR1528357;SRR1528358;SRR1048204;SRR1528359;SRR1528361;SRR1528362;SRR1528363;SRR1528365;SRR1528368;SRR1528369;SRR1528370;SRR1528371;SRR1528372;SRR1048205;SRR1528373;SRR1528374;SRR1528375;SRR1528376;SRR1528377;SRR1048206;SRR1048207;SRR1528381;SRR1528383;SRR1528386;SRR1528387;SRR1528388;SRR1528389;SRR1528390;SRR1528391;SRR1528392;SRR1528393;SRR1528394;SRR1528396;SRR1049289;SRR1528397;SRR1528399;SRR1528400;SRR1528402;SRR1528404;SRR1528405;SRR1528406;SRR1528407;SRR1528408;SRR1049290;SRR1528409;SRR1528412;SRR1528414;SRR1528416;SRR1049291;SRR1528418;SRR1528419;SRR2029783;SRR1049293;SRR890731;SRR1049294;SRR1049295
Length 22
Mature sequence(if miRNA) 44 - UUACACAGAGAGAUGACGGUGG - 65
Stem-loop(if miRNA) --   C         U           UUUGUC
  UUA ACAGAGAGA GACGGUGGAGA      U
  ||| ||||||||| |||||||||||
  AAU UGUCUCUUU CUGCCAUCUCU      C
CG   A         -           CGUUAU
Stem-loop sequence UUACACAGAGAGAUGACGGUGGAGAUUUGUCUCUAUUGCUCUCUACCGUCUUUCUCUGUAUAAGC