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BaseInfo

ncRNA ID	novel_vvi_miR51
Species	Vitis vinifera
Class	miRNA
Genome position	Chr5:5222445-5222572 [+]
Reference genome	12X
Source	SRR1049296
Length	20
Mature sequence(if miRNA)	109 - CCAACCAACACAUUGCUAGU - 128
Stem-loop(if miRNA)	--         A  AC     CAUAUUA  C  A               ----    ----  A   C  G   UAGCAAUGU UU  UUGGG       GG AU AUUACUACUCAAAAG    GUGU    GA ACU AU A   ||||||||| ||  |||||       || || |||||||||||||||    ||||    || ||| ||   AUCGUUACA AA  AACCC       CC UA UAAUGAUGAGUUUUU    UAUA    CU UGA UG A UG         C  CC     ------C  U  C               GGUG    AAAU  A   U  A
Stem-loop sequence	UAGCAAUGUAUUACUUGGGCAUAUUAGGCAUAAUUACUACUCAAAAGGUGUGAAACUCAUGAAAGUUAGUAUCUAAAAUAUGUGGUUUUUGAGUAGUAAUCAUUCCCCCCAACCAACACAUUGCUAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA148346.1	ncRNA:20   UGAUCGUUACACAACCAACC   1   |||||||||||||||||||| targets:371   ACUAGCAAUGUGUUGGUUGG   390 Target Full Sequence	0.0	TSA: Vitis vinifera Locus_4949_Transcript_1/3_Confidence_0.571.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA135263.1	ncRNA:20   UGAUCGUUACACAACCAACC   1   =|||*|||||||*||||||| targets:1462   GCUACCAAUGUGGUGGUUGG   1481 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_28067_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_002271509.3	ncRNA:20   UGAUCGUUACACAACCAACC   1   =|||*|||||||*||||||| targets:1389   GCUACCAAUGUGGUGGUUGG   1408 Target Full Sequence	2.5	PREDICTED: Vitis vinifera beta-glucosidase BoGH3B (LOC100268012), mRNA	NA	coding protein	psRNATarget