| ncRNA ID |
novel_vvi_miR49 |
| Species |
Vitis vinifera |
| Class |
miRNA |
| Genome position |
Chr5:18196843-18197063 [-] |
| Reference genome |
12X |
| Source |
SRR1049296;SRR1048203;SRR1049370;SRR1048201;SRR1048206;SRR1048208;SRR1049294;SRR1049295
|
| Length |
24 |
| Mature sequence(if miRNA) |
1 - ACCCGCAUUUUUCACGUGCAUCCC - 24 |
| Stem-loop(if miRNA) |
-- C C -AAG A G - -A GU
GA GCACGUGAAAAAUGCGGGUUCAAUUAAAUGCCACAUUUUCC CAACUAGUGUU CUUGAUCCUCAAAAUCC CAGUG AGUCAUCAAUUUG GGG CGCAU G
|| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||||||||| ||| ||||| A
CU CGUGCACUUUUUACGCCCAGGUUAAUUUACGGUGUAAAAGG GUUGAUCACAA GAACUAGGAGUUUUAGG GUUAC UCAGUGGUUAAAU CCU GCGUA A
CC A A GUUA G - A GG AA
|
| Stem-loop sequence |
GACGCACGUGAAAAAUGCGGGUUCAAUUAAAUGCCACAUUUUCCCCAACUAGUGUUAAGCUUGAUCCUCAAAAUCCACAGUGGAGUCAUCAAUUUGGGGACGCAUGUGAAAAAUGCGGGUCCAUAAAUUGGUGACUCAUUGGGGAUUUUGAGGAUCAAGAUUGAACACUAGUUGAGGAAAAUGUGGCAUUUAAUUGGACCCGCAUUUUUCACGUGCAUCCC
|