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BaseInfo

ncRNA ID	novel_vvi_miR48
Species	Vitis vinifera
Class	miRNA
Genome position	Chr5:24434382-24434460 [+]
Reference genome	12X
Source	SRR1049296
Length	22
Mature sequence(if miRNA)	58 - AUCACCAACCAAACAUGGGAUA - 79
Stem-loop(if miRNA)	--          A    AAC        A       GAU   UCCUAUGUUU GUUG   AUAGGAUA GAUAAGU   G   |||||||||| ||||   |||||||| |||||||   A   AGGGUACAAA CAAC   UAUCCUAU UUAUUCA   A AU          C    CAC        A       AUA
Stem-loop sequence	UCCUAUGUUUAGUUGAACAUAGGAUAAGAUAAGUGAUGAAAUAACUUAUUAUAUCCUAUCACCAACCAAACAUGGGAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA156549.1	ncRNA:22   AUAGGGUACAAACCAACCACUA   1   |||=|||||||||||||||||| targets:219   UAUUCCAUGUUUGGUUGGUGAU   240 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_10831_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA142511.1	ncRNA:22   AUAGGGUACAAACCAACCACUA   1   ||||||*||||||||||||||* targets:2845   UAUCCCCUGUUUGGUUGGUGAA   2866 Target Full Sequence	2.0	TSA: Vitis vinifera Locus_3727_Transcript_4/10_Confidence_0.459.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA139420.1	ncRNA:22   AUAGGGUACAAACCAACCACUA   1   **|||=*||||||||||||||* targets:264   GCUCCUCUGUUUGGUUGGUGAG   285 Target Full Sequence	3.0	TSA: Vitis vinifera Locus_2657_Transcript_9/9_Confidence_0.360.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010658465.2	ncRNA:22   AUAGGGUACAAACCAACCACUA   1   **|||=*||||||||||||||* targets:10   GCUCCUCUGUUUGGUUGGUGAG   31 Target Full Sequence	3.0	PREDICTED: Vitis vinifera subtilisin-like protease SBT2.5 (LOC100245233), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_010658466.2	ncRNA:22   AUAGGGUACAAACCAACCACUA   1   **|||=*||||||||||||||* targets:10   GCUCCUCUGUUUGGUUGGUGAG   31 Target Full Sequence	3.0	PREDICTED: Vitis vinifera subtilisin-like protease SBT2.5 (LOC100245233), transcript variant X6, mRNA	NA	coding protein	psRNATarget