ncRNA ID | novel_vvi_miR45 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr11:6647065-6647228 [+] |
Reference genome | 12X |
Source | SRR1049296 |
Length | 24 |
Mature sequence(if miRNA) | 141 - AGUCACCAACUACGGCUUUAACUU - 164 |
Stem-loop(if miRNA) |
--CA    A           A           -   -    A            AC             C          CUA     UAAA CCGUAGUUGGU ACUACGGUUUU AUU UUUU AAAAUAGUCAAA  CGUAGUCAUCAAU ACGGUUUUAA   U     |||| ||||||||||| ||||||||||| ||| |||| ||||||||||||  ||||||||||||| ||||||||||     AUUU GGCAUCAACCA UGAUGCCGAAA UGA AAAA UUUUAUCAGUUU  GCAUCAGUGGUUG UGCCAAAAUU   A UUCA    C           C           C   C    A            CA             A          UGA |
Stem-loop sequence | CAUAAAACCGUAGUUGGUAACUACGGUUUUAUUUUUUAAAAAUAGUCAAAACCGUAGUCAUCAAUCACGGUUUUAACUAUAAGUUUAAAACCGUAGUUGGUGACUACGACUUUGACUAUUUUAAAAACAGUCAAAGCCGUAGUCACCAACUACGGCUUUAACUU |