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BaseInfo

ncRNA ID novel_vvi_miR45
Species Vitis vinifera
Class miRNA
Genome position Chr11:6647065-6647228 [+]
Reference genome 12X
Source SRR1049296
Length 24
Mature sequence(if miRNA) 141 - AGUCACCAACUACGGCUUUAACUU - 164
Stem-loop(if miRNA) --CA    A           A           -   -    A            AC             C          CUA
    UAAA CCGUAGUUGGU ACUACGGUUUU AUU UUUU AAAAUAGUCAAA  CGUAGUCAUCAAU ACGGUUUUAA   U
    |||| ||||||||||| ||||||||||| ||| |||| ||||||||||||  ||||||||||||| ||||||||||
    AUUU GGCAUCAACCA UGAUGCCGAAA UGA AAAA UUUUAUCAGUUU  GCAUCAGUGGUUG UGCCAAAAUU   A
UUCA    C           C           C   C    A            CA             A          UGA
Stem-loop sequence CAUAAAACCGUAGUUGGUAACUACGGUUUUAUUUUUUAAAAAUAGUCAAAACCGUAGUCAUCAAUCACGGUUUUAACUAUAAGUUUAAAACCGUAGUUGGUGACUACGACUUUGACUAUUUUAAAAACAGUCAAAGCCGUAGUCACCAACUACGGCUUUAACUU