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BaseInfo

ncRNA ID novel_vvi_miR42
Species Vitis vinifera
Class miRNA
Genome position Chr4:4038613-4038669 [-]
Reference genome 12X
Source SRR1049296
Length 24
Mature sequence(if miRNA) 1 - ACAUUCUUCGUACCCUUCUGAAUU - 24
Stem-loop(if miRNA) --A UG                      
   U  GGAGGGUACGAAGAAUGUGAGGA
   |  ||||||||||||||||||||||U
   A  CUUCCCAUGCUUCUUACACUCCU
UUA GU                      
Stem-loop sequence AUUGGGAGGGUACGAAGAAUGUGAGGAUUCCUCACAUUCUUCGUACCCUUCUGAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
FQ395742.1
ncRNA:24   UUAAGUCUUCCCAUGCUUCUUACA   1
  ||||-||=||*|||||||||||||
targets:1369   AAUU-AGGAGAGUACGAAGAAUGU   1391

2.0 Vitis vinifera clone SS0AFA14YF07 NA coding protein psRNATarget