Search result

BaseInfo

ncRNA ID novel_vvi_miR39
Species Vitis vinifera
Class miRNA
Genome position Chr4:11279682-11279838 [-]
Reference genome 12X
Source SRR1049296;SRR1048205
Length 24
Mature sequence(if miRNA) 134 - AAGCACUUUCAGUAUAAACCCAAU - 157
Stem-loop(if miRNA) --AA                 C    A          UGU       -----A               --CAC     CCAA
    GCACUUUCAGUAUAAAC CAAU UUUUUAAAAU   GGAAGGU      UCAAGAGACACCUUU     AAUUC    A
    ||||||||||||||||| |||| ||||||||||   |||||||      |||||||||||||||     |||||
    UGUGAAAGUCAUAUUUG GUUA AAAAAUUUUA   CCUUCCA      AGUUCUCUGUGGAAG     UUAAG    A
UCUC                 A    A          UUC       CAGAAA               UUAUA     AUAA
Stem-loop sequence AAGCACUUUCAGUAUAAACCCAAUAUUUUUAAAAUUGUGGAAGGUAUCAAGAGACACCUUUCACAAUUCCCAAAAAAUAGAAUUAUAUUGAAGGUGUCUCUUGAAAAGACACCUUCCCUUAUUUUAAAAAAAUUGAGUUUAUACUGAAAGUGUCUCU