ncRNA ID | novel_vvi_miR39 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr4:11279682-11279838 [-] |
Reference genome | 12X |
Source | SRR1049296;SRR1048205 |
Length | 24 |
Mature sequence(if miRNA) | 134 - AAGCACUUUCAGUAUAAACCCAAU - 157 |
Stem-loop(if miRNA) |
--AA                 C    A          UGU       -----A               --CAC     CCAA     GCACUUUCAGUAUAAAC CAAU UUUUUAAAAU   GGAAGGU      UCAAGAGACACCUUU     AAUUC    A     ||||||||||||||||| |||| ||||||||||   |||||||      |||||||||||||||     |||||     UGUGAAAGUCAUAUUUG GUUA AAAAAUUUUA   CCUUCCA      AGUUCUCUGUGGAAG     UUAAG    A UCUC                 A    A          UUC       CAGAAA               UUAUA     AUAA |
Stem-loop sequence | AAGCACUUUCAGUAUAAACCCAAUAUUUUUAAAAUUGUGGAAGGUAUCAAGAGACACCUUUCACAAUUCCCAAAAAAUAGAAUUAUAUUGAAGGUGUCUCUUGAAAAGACACCUUCCCUUAUUUUAAAAAAAUUGAGUUUAUACUGAAAGUGUCUCU |