ncRNA ID | novel_vvi_miR38 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr4:13349317-13349488 [-] |
Reference genome | 12X |
Source | SRR1049296 |
Length | 24 |
Mature sequence(if miRNA) | 149 - AGAGACACUUUUAGUAUAAAUCCA - 172 |
Stem-loop(if miRNA) |
--            AG     A   --  UU     GAAU             U            U    AG    -UA   G        AGAGACACUUUU  UAUAA UCC  AA  UUUUG    UGUAGAAGGUGUC CUUGAAGAGACA CUUU  UAUA   UUG AAUUUG   ||||||||||||  ||||| |||  ||  |||||    ||||||||||||| |||||||||||| ||||  ||||   ||| |||||U   UCUCUGUGGAAG  AUGUU AGG  UU  AAAAU    AUAUUUUCUACAG GAACUUCUCUGU GAAA  GUGU   GGU UUAAGG CU            --     A   AU  UU     AAAU             U            -    -G    UAA   G      |
Stem-loop sequence | AGAGACACUUUUAGUAUAAAUCCAAUUUUUUGGAAUUGUAGAAGGUGUCUCUUGAAGAGACAUCUUUAGUAUAUAUUGGAAUUUGUGGAAUUGUGGAAUUGUGGAAAGUGUCUCUUCAAGUGACAUCUUUUAUAUAAAUAAAAUUUUUAGGAAUUGUAGAAGGUGUCUCUUC |