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BaseInfo

ncRNA ID novel_vvi_miR35
Species Vitis vinifera
Class miRNA
Genome position Chr3:509066-509106 [-]
Reference genome 12X
Source SRR1049296
Length 19
Mature sequence(if miRNA) 1 - CUCACAUUCUUCGUACCCG - 19
Stem-loop(if miRNA) --         C  A    A
  GGUACGAAG AU UGAG A
  ||||||||| || |||| U
  CCAUGCUUC UA ACUC U
GC         U  C    C
Stem-loop sequence GGUACGAAGCAUAUGAGAAUUCCUCACAUUCUUCGUACCCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
FQ395742.1
ncRNA:19   GCCCAUGCUUCUUACACUC   1
  *|||*||||||||||||||
targets:1003   AGGGCACGAAGAAUGUGAG   1021

2.0 Vitis vinifera clone SS0AFA14YF07 NA coding protein psRNATarget
FQ395742.1
ncRNA:19   GCCCAUGCUUCUUACACUC   1
  *|*||||||||||||||||
targets:1376   AGAGUACGAAGAAUGUGAG   1394

2.0 Vitis vinifera clone SS0AFA14YF07 NA coding protein psRNATarget