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BaseInfo

ncRNA ID novel_vvi_miR34
Species Vitis vinifera
Class miRNA
Genome position Chr3:3989383-3989434 [-]
Reference genome 12X
Source SRR1049296;SRR1049371;SRR1049373;SRR1528359;SRR1048205;SRR1048206;SRR1048207
Length 24
Mature sequence(if miRNA) 1 - AUAGUCAAAGCCGUAGUCACCAAC - 24
Stem-loop(if miRNA) --           A           U
  UGGUGACUACG CUUUGACUGUU A
  ||||||||||| |||||||||||
  ACCACUGAUGC GAAACUGAUAA A
CA           C           A
Stem-loop sequence UGGUGACUACGACUUUGACUGUUUAAAAAUAGUCAAAGCCGUAGUCACCAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010658998.2
ncRNA:24   CAACCACUGAUGCCGAAACUGAUA   1
  ||||||||||||||||||||=|||
targets:3   GUUGGUGACUACGGCUUUGAUUAU   26

1.5 PREDICTED: Vitis vinifera mucin-5AC-like (LOC104880885), transcript variant X2, mRNA NA coding protein psRNATarget