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BaseInfo

ncRNA ID	novel_vvi_miR33
Species	Vitis vinifera
Class	miRNA
Genome position	Chr3:8422560-8422634 [-]
Reference genome	12X
Source	SRR1049296;SRR1049289
Length	21
Mature sequence(if miRNA)	1 - CAGCCAAAUAACAAACACCAC - 21
Stem-loop(if miRNA)	--          U                   C   A   GGUGUUUGUU UUUGGUUGAAUAGAAAAGG CAA A   |||||||||| ||||||||||||||||||| ||| U   CCACAAACAA AAACCGACUUAUCUUUUUC GUU A CA          U                   A   U
Stem-loop sequence	GGUGUUUGUUUUUUGGUUGAAUAGAAAAGGCCAAAAUAUUUGACUUUUUCUAUUCAGCCAAAUAACAAACACCAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_002263750.3	ncRNA:21   CACCACAAACAAUAAACCGAC   1   *||*||*|||||||||||||| targets:1346   AUGAUGAUUGUUAUUUGGCUG   1366 Target Full Sequence	2.0	PREDICTED: Vitis vinifera uncharacterized LOC100254432 (LOC100254432), mRNA	NA	coding protein	psRNATarget
KA161886.1	ncRNA:21   CACCACAAACAAUAAACCGAC   1   ||||||||||||*|||||||* targets:175   GUGGUGUUUGUUUUUUGGCUU   195 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_14723_Transcript_3/3_Confidence_0.750.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010653705.2	ncRNA:21   CACCACAAACAAUAAACCGAC   1   |||*||||*|||||||||||| targets:163   GUGUUGUUGGUUAUUUGGCUG   183 Target Full Sequence	2.5	PREDICTED: Vitis vinifera serine/threonine-protein kinase Nek2 (LOC100852976), transcript variant X7, mRNA	NA	coding protein	psRNATarget
FQ380282.1	ncRNA:21   CACCACAAACAAUAAACCGAC   1   **|||*||||||||*|||||| targets:816   UGGGUUUUUGUUAUGUGGCUG   836 Target Full Sequence	2.5	Vitis vinifera clone SS0ACG74YH17	NA	coding protein	psRNATarget