ncRNA ID | novel_vvi_miR31 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr3:17925303-17925480 [-] |
Reference genome | 12X |
Source | SRR1049296;SRR1049291 |
Length | 24 |
Mature sequence(if miRNA) | 155 - ACCUAAACCUGGCCGGUCCGCACC - 178 |
Stem-loop(if miRNA) |
--  C       -GG           C   A     A            U           G    C          AAG  UA     U   AC UAAACCU   CCGGUCCGCAC AAC CACGU UUAUUAAAGUGU ACACAUGUAGU CCAU AUAUGAAGAA   UG  UGAUU U   || |||||||   ||||||||||| ||| ||||| |||||||||||| ||||||||||| |||| ||||||||||   ||  ||||| U   UG AUUUGGA   GGCCAGGUGUG UUG GUGUA AGUAGUUUCACA UGUGUACAUCA GGUA UAUAUUUCUU   AC  ACUAA U UU  A       GAG           A   G     C            U           G    U          --G  UA     U |
Stem-loop sequence | ACCUAAACCUGGCCGGUCCGCACCAACACACGUAUUAUUAAAGUGUUACACAUGUAGUGCCAUCAUAUGAAGAAAAGUGUAUGAUUUUUUUAAUCAAUCAGUUCUUUAUAUUAUGGGACUACAUGUGUUACACUUUGAUGACAUGUGGGUUAGUGUGGACCGGGAGAGGUUUAAGUUU |