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BaseInfo

ncRNA ID novel_vvi_miR31
Species Vitis vinifera
Class miRNA
Genome position Chr3:17925303-17925480 [-]
Reference genome 12X
Source SRR1049296;SRR1049291
Length 24
Mature sequence(if miRNA) 155 - ACCUAAACCUGGCCGGUCCGCACC - 178
Stem-loop(if miRNA) --  C       -GG           C   A     A            U           G    C          AAG  UA     U
  AC UAAACCU   CCGGUCCGCAC AAC CACGU UUAUUAAAGUGU ACACAUGUAGU CCAU AUAUGAAGAA   UG  UGAUU U
  || |||||||   ||||||||||| ||| ||||| |||||||||||| ||||||||||| |||| ||||||||||   ||  ||||| U
  UG AUUUGGA   GGCCAGGUGUG UUG GUGUA AGUAGUUUCACA UGUGUACAUCA GGUA UAUAUUUCUU   AC  ACUAA U
UU  A       GAG           A   G     C            U           G    U          --G  UA     U
Stem-loop sequence ACCUAAACCUGGCCGGUCCGCACCAACACACGUAUUAUUAAAGUGUUACACAUGUAGUGCCAUCAUAUGAAGAAAAGUGUAUGAUUUUUUUAAUCAAUCAGUUCUUUAUAUUAUGGGACUACAUGUGUUACACUUUGAUGACAUGUGGGUUAGUGUGGACCGGGAGAGGUUUAAGUUU