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BaseInfo

ncRNA ID novel_vvi_miR25
Species Vitis vinifera
Class miRNA
Genome position Chr5:1103872-1104095 [+]
Reference genome 12X
Source SRR1048203
Length 22
Mature sequence(if miRNA) 1 - ACAAUUCCUCAAGGAAACUCGU - 22
Stem-loop(if miRNA) --AC            A           G G                      A            ----U      AA            ---------    A      -   AUUAA
    AAUUCCUCAAGG AACUCGUCUCU U AAGAGACGAGUUCCCAUGAAAA AAAUAUAUAUAU     UUUUAA  AUUCCCAAAUUA         AAAA AAUUCC CAA     A
    |||||||||||| ||||||||||| | |||||||||||||||||||||| ||||||||||||     ||||||  ||||||||||||         |||| |||||| |||     A
    UUAAGGAGUUCC UUGAGCAGAGA A UUUUCUGCUCAAGGGUACUUUU UUUAUAUAUAUA     AAAAUU  UAAGGGUUUAAU         UUUU UUAAGG GUU     A
UUUU            C           - G                      G            UAUAU      --            AUCUUUUUU    G      A   CCCUU
Stem-loop sequence ACAAUUCCUCAAGGAAACUCGUCUCUGUGAAGAGACGAGUUCCCAUGAAAAAAAAUAUAUAUAUUUUUUAAAAAUUCCCAAAUUAAAAAAAAUUCCCAAAUUAAAAAUUCCCUUGAGGAAUUGUUUUUUUUUUCUAUAAUUUGGGAAUUUAAAAUAUAUAUAUAUAUAUUUGUUUUCAUGGGAACUCGUCUUUUGAAGAGACGAGUUCCCUUGAGGAAUUUUUU