ncRNA ID | novel_vvi_miR25 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr5:1103872-1104095 [+] |
Reference genome | 12X |
Source | SRR1048203 |
Length | 22 |
Mature sequence(if miRNA) | 1 - ACAAUUCCUCAAGGAAACUCGU - 22 |
Stem-loop(if miRNA) |
--AC            A           G G                      A            ----U      AA            ---------    A      -   AUUAA     AAUUCCUCAAGG AACUCGUCUCU U AAGAGACGAGUUCCCAUGAAAA AAAUAUAUAUAU     UUUUAA  AUUCCCAAAUUA         AAAA AAUUCC CAA     A     |||||||||||| ||||||||||| | |||||||||||||||||||||| ||||||||||||     ||||||  ||||||||||||         |||| |||||| |||     A     UUAAGGAGUUCC UUGAGCAGAGA A UUUUCUGCUCAAGGGUACUUUU UUUAUAUAUAUA     AAAAUU  UAAGGGUUUAAU         UUUU UUAAGG GUU     A UUUU            C           - G                      G            UAUAU      --            AUCUUUUUU    G      A   CCCUU |
Stem-loop sequence | ACAAUUCCUCAAGGAAACUCGUCUCUGUGAAGAGACGAGUUCCCAUGAAAAAAAAUAUAUAUAUUUUUUAAAAAUUCCCAAAUUAAAAAAAAUUCCCAAAUUAAAAAUUCCCUUGAGGAAUUGUUUUUUUUUUCUAUAAUUUGGGAAUUUAAAAUAUAUAUAUAUAUAUUUGUUUUCAUGGGAACUCGUCUUUUGAAGAGACGAGUUCCCUUGAGGAAUUUUUU |