| ncRNA ID | novel_vvi_miR23 |
| Species | Vitis vinifera |
| Class | miRNA |
| Genome position | Chr19:18678364-18678431 [+] |
| Reference genome | 12X |
| Source | SRR1049296;SRR1049370;SRR1049371;SRR1049373;SRR1528350;SRR1528351;SRR1528353;SRR1528356;SRR1048201;SRR1528358;SRR1528361;SRR1528364;SRR1528367;SRR1528369;SRR1048205;SRR1528372;SRR1528373;SRR1528374;SRR1528375;SRR1528376;SRR1048206;SRR1528380;SRR1048207;SRR1528381;SRR1528382;SRR1528383;SRR1048208;SRR1528386;SRR1528387;SRR1528388;SRR1528389;SRR1528390;SRR1528391;SRR1528392;SRR1528393;SRR1528394;SRR1528396;SRR1528397;SRR1528398;SRR1528400;SRR1528404;SRR1528405;SRR1528407;SRR1528409;SRR1049291;SRR1528417;SRR2029783;SRR2029784;SRR1049293;SRR1048203;SRR1049295 |
| Length | 21 |
| Mature sequence(if miRNA) | 48 - GUUGGAAGUCGGUGGGGGAAC - 68 |
| Stem-loop(if miRNA) |
-- AA UGA GAU UCCCUCA GGCUUCCAAUUUUCC CU U ||||||| ||||||||||||||| || AGGGGGU CUGAAGGUUGAAAGG GA A CA GG UUA ACU |
| Stem-loop sequence | UCCCUCAAAGGCUUCCAAUUUUCCUGACUGAUUAUCAAGAUUGGAAAGUUGGAAGUCGGUGGGGGAAC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| KA151998.1 |
|
1.0 | TSA: Vitis vinifera Locus_17983_Transcript_4/7_Confidence_0.500.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| KA151999.1 |
|
1.0 | TSA: Vitis vinifera Locus_17983_Transcript_7/7_Confidence_0.538.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| XM_002282177.3 |
|
2.5 | PREDICTED: Vitis vinifera uncharacterized LOC100259078 (LOC100259078), mRNA | NA | coding protein | psRNATarget | |||||||||
| FQ393152.1 |
|
2.5 | Vitis vinifera clone SS0AFA2YG11 | NA | coding protein | psRNATarget |