| ncRNA ID | novel_vvi_miR19 |
| Species | Vitis vinifera |
| Class | miRNA |
| Genome position | Chr19:7868116-7868335 [+] |
| Reference genome | 12X |
| Source | SRR1049296 |
| Length | 19 |
| Mature sequence(if miRNA) | 202 - CGGCAGUGAUUACAUAUUA - 220 |
| Stem-loop(if miRNA) |
--C CA A GA UUCU CAAUCUGUUUGCCUUCCCGGAUAUUUUGUUUUGCUAGAAGAAAUUAAGAGAAAAGAGGAGUAAAUUUGGAAUCUUUAAGAUAACU UGUGU AAUCA CUGC CA U C ||||| ||||| |||| || | AUACA UUAGU GACG CU A U AUU -- - -G ---- CUAUUGGGGUUUUAGUGUAGAAAUACCAAAGACUUUUAAAGCAUCAAUUCCCUUUUUUUUUUUUUUCUUUCCUUCUUUUUAGCCU |
| Stem-loop sequence | CUGUGUCAAAUCAACUGCGACAUUCUUCAAUCUGUUUGCCUUCCCGGAUAUUUUGUUUUGCUAGAAGAAAUUAAGAGAAAAGAGGAGUAAAUUUGGAAUCUUUAAGAUAACUCUUCCGAUUUUUCUUCCUUUCUUUUUUUUUUUUUUCCCUUAACUACGAAAUUUUCAGAAACCAUAAAGAUGUGAUUUUGGGGUUAUCAUCGGCAGUGAUUACAUAUUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| KA155672.1 |
|
0.0 | TSA: Vitis vinifera Locus_10375_Transcript_1/2_Confidence_1.000.Vivi mRNA sequence | NA | coding protein | psRNATarget |