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BaseInfo

ncRNA ID novel_vvi_miR14
Species Vitis vinifera
Class miRNA
Genome position Chr4:6530314-6530374 [+]
Reference genome 12X
Source SRR1048203;SRR1049372;SRR1049373;SRR1528370;SRR1528371;SRR1048201;SRR1528374;SRR1048207;SRR1528397;SRR2029783;SRR1049293;SRR890731
Length 21
Mature sequence(if miRNA) 41 - AUUAAUUGUUCCCACCGCUCU - 61
Stem-loop(if miRNA) --AA  A      G              UA
    CG UGGGAA AAUUAAUAUAAUUU  A
    || |||||| ||||||||||||||  A
    GC ACCCUU UUAAUUAUAUUAAA  A
UCUC  C      G              UU
Stem-loop sequence AACGAUGGGAAGAAUUAAUAUAAUUUUAAAAUUAAAUUAUAUUAAUUGUUCCCACCGCUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019225492.1
ncRNA:21   UCUCGCCACCCUUGUUAAUUA   1
  =||||||||||||||||||||
targets:1827   GGAGCGGUGGGAACAAUUAAU   1847

0.0 PREDICTED: Vitis vinifera probable alkaline/neutral invertase F (LOC100262104), transcript variant X2, mRNA NA coding protein psRNATarget
XM_002264250.2
ncRNA:21   UCUCGCCACCCUUGUUAAUUA   1
  =||||||||||||||||||||
targets:1916   GGAGCGGUGGGAACAAUUAAU   1936

0.0 PREDICTED: Vitis vinifera probable alkaline/neutral invertase F (LOC100262104), transcript variant X1, mRNA NA coding protein psRNATarget