ncRNA ID | novel_vvi_miR12 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr18:13887184-13887293 [+] |
Reference genome | 12X |
Source | SRR1049296;SRR1049370;SRR1049373;SRR1528357;SRR1528364;SRR1528365;SRR1528368;SRR1048206;SRR1528380;SRR1048207;SRR1528385;SRR1528391;SRR1049289;SRR1528406;SRR1528408;SRR1528409;SRR1528412;SRR1528416;SRR1049291;SRR890731;SRR1048203;SRR1049294 |
Length | 21 |
Mature sequence(if miRNA) | 90 - CGUGAGCUCUAACAUUGGUGA - 110 |
Stem-loop(if miRNA) |
--    C  C            UC    C  C     ----  -C        CACAA  G   ACCG UG UAGAGCUCGCGA  UCCU UA GUGUU    GG  CCUACCUG     AG A   |||| || ||||||||||||  |||| || |||||    ||  ||||||||     ||   UGGU AC AUCUCGAGUGCU  AGGA AU CACAG    CC  GGAUGGAU     UC C AG    U  A            --    U  -     GAGC  UU        ----C  A |
Stem-loop sequence | ACCGCUGCUAGAGCUCGCGAUCUCCUCUACGUGUUGGCCCUACCUGCACAAAGGACACUCUAGGUAGGUUCCCGAGGACACUAUAGGAUCGUGAGCUCUAACAUUGGUGA |