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BaseInfo

ncRNA ID novel_vvi_miR12
Species Vitis vinifera
Class miRNA
Genome position Chr18:13887184-13887293 [+]
Reference genome 12X
Source SRR1049296;SRR1049370;SRR1049373;SRR1528357;SRR1528364;SRR1528365;SRR1528368;SRR1048206;SRR1528380;SRR1048207;SRR1528385;SRR1528391;SRR1049289;SRR1528406;SRR1528408;SRR1528409;SRR1528412;SRR1528416;SRR1049291;SRR890731;SRR1048203;SRR1049294
Length 21
Mature sequence(if miRNA) 90 - CGUGAGCUCUAACAUUGGUGA - 110
Stem-loop(if miRNA) --    C  C            UC    C  C     ----  -C        CACAA  G
  ACCG UG UAGAGCUCGCGA  UCCU UA GUGUU    GG  CCUACCUG     AG A
  |||| || ||||||||||||  |||| || |||||    ||  ||||||||     ||
  UGGU AC AUCUCGAGUGCU  AGGA AU CACAG    CC  GGAUGGAU     UC C
AG    U  A            --    U  -     GAGC  UU        ----C  A
Stem-loop sequence ACCGCUGCUAGAGCUCGCGAUCUCCUCUACGUGUUGGCCCUACCUGCACAAAGGACACUCUAGGUAGGUUCCCGAGGACACUAUAGGAUCGUGAGCUCUAACAUUGGUGA