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BaseInfo

ncRNA ID novel_vvi_miR10
Species Vitis vinifera
Class miRNA
Genome position Chr18:9925308-9925375 [+]
Reference genome 12X
Source SRR1049296
Length 21
Mature sequence(if miRNA) 48 - UUUCCACCGCUUAAACCCUUG - 68
Stem-loop(if miRNA) --       U  U            CAU -   UC
  AGGGUUU AA CGGUGGAAAGGA   C GAG  G
  ||||||| || ||||||||||||   | |||
  UCCCAAA UU GCCACCUUUUCU   G CUU  G
GU       -  C            AAU A   UU
Stem-loop sequence AGGGUUUUAAUCGGUGGAAAGGACAUCGAGUCGGUUUUCAGUAAUCUUUUCCACCGCUUAAACCCUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_002283974.3
ncRNA:21   GUUCCCAAAUUCGCCACCUUU   1
  ||||*|**|||||||||||||
targets:417   CAAGAGGAUAAGCGGUGGAAA   437

3.0 PREDICTED: Vitis vinifera uncharacterized LOC100262828 (LOC100262828), mRNA NA coding protein psRNATarget