ncRNA ID | novel_vvi_miR10 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr18:9925308-9925375 [+] |
Reference genome | 12X |
Source | SRR1049296 |
Length | 21 |
Mature sequence(if miRNA) | 48 - UUUCCACCGCUUAAACCCUUG - 68 |
Stem-loop(if miRNA) |
--       U  U            CAU -   UC   AGGGUUU AA CGGUGGAAAGGA   C GAG  G   ||||||| || ||||||||||||   | |||   UCCCAAA UU GCCACCUUUUCU   G CUU  G GU       -  C            AAU A   UU |
Stem-loop sequence | AGGGUUUUAAUCGGUGGAAAGGACAUCGAGUCGGUUUUCAGUAAUCUUUUCCACCGCUUAAACCCUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_002283974.3 |
|
3.0 | PREDICTED: Vitis vinifera uncharacterized LOC100262828 (LOC100262828), mRNA | NA | coding protein | psRNATarget |