ncRNA ID | novel_vvi_miR9 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr18:4890594-4890645 [-] |
Reference genome | 12X |
Source | SRR1049296 |
Length | 24 |
Mature sequence(if miRNA) | 29 - AUCACUUAUCAUAUCCUAUGUUCA - 52 |
Stem-loop(if miRNA) |
--          A   CC     UCA   AUCACUUAUC UAU  UAUGU   A   |||||||||| |||  |||||   UAGUGAAUAG AUA  GUACA   C GA          G   AA     CAC |
Stem-loop sequence | AUCACUUAUCAUAUCCUAUGUUCAACCACACAUGAAAUAGGAUAAGUGAUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA135093.1 |
|
2.5 | TSA: Vitis vinifera Locus_10553_Transcript_1/3_Confidence_0.500.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
KA135094.1 |
|
2.5 | TSA: Vitis vinifera Locus_10553_Transcript_3/3_Confidence_0.750.Vivi mRNA sequence | NA | coding protein | psRNATarget |