Search result

BaseInfo

ncRNA ID novel_vvi_miR8
Species Vitis vinifera
Class miRNA
Genome position Chr18:12525278-12525331 [-]
Reference genome 12X
Source SRR1049296;SRR1049371;SRR1049372;SRR1528352;SRR1528358;SRR1048207;SRR1528412
Length 24
Mature sequence(if miRNA) 1 - AUAGUCAAAGCCGUAGUCACCAAC - 24
Stem-loop(if miRNA) --           AU       U   U
  UGGUGACUACG  UUUGACU UUU U
  |||||||||||  ||||||| |||
  ACCACUGAUGC  AAACUGA AAA U
CA           CG       U   U
Stem-loop sequence UGGUGACUACGAUUUUGACUUUUUUUUUAAAUAGUCAAAGCCGUAGUCACCAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010658998.2
ncRNA:24   CAACCACUGAUGCCGAAACUGAUA   1
  ||||||||||||||||||||=|||
targets:3   GUUGGUGACUACGGCUUUGAUUAU   26

1.5 PREDICTED: Vitis vinifera mucin-5AC-like (LOC104880885), transcript variant X2, mRNA NA coding protein psRNATarget