ncRNA ID | novel_vvi_miR8 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr18:12525278-12525331 [-] |
Reference genome | 12X |
Source | SRR1049296;SRR1049371;SRR1049372;SRR1528352;SRR1528358;SRR1048207;SRR1528412 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAGUCAAAGCCGUAGUCACCAAC - 24 |
Stem-loop(if miRNA) |
--           AU       U   U   UGGUGACUACG  UUUGACU UUU U   |||||||||||  ||||||| |||   ACCACUGAUGC  AAACUGA AAA U CA           CG       U   U |
Stem-loop sequence | UGGUGACUACGAUUUUGACUUUUUUUUUAAAUAGUCAAAGCCGUAGUCACCAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010658998.2 |
|
1.5 | PREDICTED: Vitis vinifera mucin-5AC-like (LOC104880885), transcript variant X2, mRNA | NA | coding protein | psRNATarget |