ncRNA ID | novel_vvi_miR4 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr17:1873834-1874025 [-] |
Reference genome | 12X |
Source | SRR1049296;SRR1049371;SRR1528364;SRR1528371;SRR1528380;SRR1528388;SRR1528392;SRR1528406;SRR1049294;SRR1049295 |
Length | 24 |
Mature sequence(if miRNA) | 169 - AGAGACCACCUAGUCCUGUUAAGA - 192 |
Stem-loop(if miRNA) |
--            G           C        A        GC  -                 -     AAGUUCU   U     --U    CAACCAU   AGAGACCACCUA UCCUGUUAAGA CAAGUUUA GGGCCUAA  UC GAGAGGGGCUUAGGUUU GGGGG       UUA GGAAU   GCCU       U   |||||||||||| ||||||||||| |||||||| ||||||||  || ||||||||||||||||| |||||       ||| |||||   ||||   UUUCUGGUGGGU AGGACAAUUCU GUUCAAAU UCUGGAUU  AG UUCUCCCCGAAUCCAAA CCCUC       AAU CCUUA   UGGA       U CC            G           A        A        -A  A                 A     -------   C     UUU    AUAACCU |
Stem-loop sequence | AGAGACCACCUAGUCCUGUUAAGACCAAGUUUAAGGGCCUAAGCUCGAGAGGGGCUUAGGUUUGGGGGAAGUUCUUUAUGGAAUUGCCUCAACCAUUUUCCAAUAAGGUUUUAUUCCCUAACUCCCAAAACCUAAGCCCCUCUUAGAAUUAGGUCUAUAAACUUGAUCUUAACAGGAGUGGGUGGUCUUUCC |