ncRNA ID | novel_vvi_miR3 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr4:6524880-6524940 [+] |
Reference genome | 12X |
Source | SRR1048203;SRR1049373;SRR1528358;SRR1528371;SRR1049289;SRR1528397;SRR2029783;SRR2029784;SRR1049293 |
Length | 21 |
Mature sequence(if miRNA) | 41 - AUUAAUUGUUCCCACCGCUCU - 61 |
Stem-loop(if miRNA) |
--AA  A                     UA     CG UGGGAAUAAUUAAUAUAAUUU  A     || |||||||||||||||||||||  A     GC ACCCUUGUUAAUUAUAUUAAA  A UCUC  C                     UU |
Stem-loop sequence | AACGAUGGGAAUAAUUAAUAUAAUUUUAAAAUUAAAUUAUAUUAAUUGUUCCCACCGCUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019225492.1 |
|
0.0 | PREDICTED: Vitis vinifera probable alkaline/neutral invertase F (LOC100262104), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_002264250.2 |
|
0.0 | PREDICTED: Vitis vinifera probable alkaline/neutral invertase F (LOC100262104), transcript variant X1, mRNA | NA | coding protein | psRNATarget |