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BaseInfo

ncRNA ID	novel_vvi_miR1
Species	Vitis vinifera
Class	miRNA
Genome position	Chr13:19461020-19461214 [-]
Reference genome	12X
Source	SRR1048201;SRR1048203;SRR1048204;SRR1048205;SRR1049289;SRR1049295;SRR1049296
Length	24
Mature sequence(if miRNA)	172 - UGCACUAUUAUUUCUAAUUUCACG - 195
Stem-loop(if miRNA)	--              U       C A            A                               UG    -----ACC          AAAA  C   UGCACUAUUAUUUC AAUUUCA G UUGACAGUGAUC UUAAAAUUGGGAAUAUUACAAAGUACAGAAA  AAAA        AUAAGAGAAG    GC C   |||||||||||||| ||||||| | |||||||||||| |||||||||||||||||||||||||||||||  ||||        ||||||||||    ||   ACGUGAUAAUAAAG UUAAAGU U AAUUGUUACUAG AAUUUUAACUCUUAUAAUGUUUCAUGUUUUU  UUUU        UAUUCUCUUC    CG U UA              C       A C            A                               GU    CAAUAUCC          ----  C
Stem-loop sequence	UGCACUAUUAUUUCUAAUUUCACGAUUGACAGUGAUCAUUAAAAUUGGGAAUAUUACAAAGUACAGAAAUGAAAAACCAUAAGAGAAGAAAAGCCCUCGCCUUCUCUUAUCCUAUAACUUUUUGUUUUUGUACUUUGUAAUAUUCUCAAUUUUAAAGAUCAUUGUUAACUAUGAAAUUCGAAAUAAUAGUGCAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA172568.1	ncRNA:24   GCACUUUAAUCUUUAUUAUCACGU   1   |*|**|||||*||||||||||||| targets:680   CAUACAAUUAUAAAUAAUAGUGCA   703 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_549_Transcript_9/12_Confidence_0.390.Vivi mRNA sequence	NA	coding protein	psRNATarget