ncRNA ID | novel_rco_miR110 |
Species | Ricinus communis |
Class | miRNA |
Genome position | NW_002994657.1:130827-130916 [+] |
Reference genome | JCVI_RCG_1.1 |
Source | SRR1027045 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGCUGAGGGGAGUCCGGAUAUGCC - 24 |
Stem-loop(if miRNA) |
-AGC      G    C    -AUGCCCUCCGA     CAA     A     UGAGGG AGUC GGAU            UCGGC   AGUUC C     |||||| |||| ||||            |||||   |||||     AUUCCC UCGG CCUA            AGCCG   UCAAG C UUUC      A    C    GAACCCGUAAAA     --C     G |
Stem-loop sequence | AGCUGAGGGGAGUCCGGAUAUGCCCUCCGAUCGGCCAAAGUUCACCGGAACUCGCCGAAAAAUGCCCAAGAUCCCGGCUACCCUUACUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_002522176.2 |
|
2.5 | PREDICTED: Ricinus communis terpene synthase 10-like (LOC8275144), mRNA | terpene synthase 10-like(LOC8275144) | coding protein | psRNATarget |