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BaseInfo

ncRNA ID novel_rco_miR110
Species Ricinus communis
Class miRNA
Genome position NW_002994657.1:130827-130916 [+]
Reference genome JCVI_RCG_1.1
Source SRR1027045
Length 24
Mature sequence(if miRNA) 1 - AGCUGAGGGGAGUCCGGAUAUGCC - 24
Stem-loop(if miRNA) -AGC      G    C    -AUGCCCUCCGA     CAA     A
    UGAGGG AGUC GGAU            UCGGC   AGUUC C
    |||||| |||| ||||            |||||   |||||
    AUUCCC UCGG CCUA            AGCCG   UCAAG C
UUUC      A    C    GAACCCGUAAAA     --C     G
Stem-loop sequence AGCUGAGGGGAGUCCGGAUAUGCCCUCCGAUCGGCCAAAGUUCACCGGAACUCGCCGAAAAAUGCCCAAGAUCCCGGCUACCCUUACUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_002522176.2
ncRNA:24   CC-GUAUAGGCCUGAGGGGAGUCGA   1
  ||-=|||||||*||||=||||||||
targets:98   GGAUAUAUCCGAACUCUCCUCAGCU   122

2.5 PREDICTED: Ricinus communis terpene synthase 10-like (LOC8275144), mRNA terpene synthase 10-like(LOC8275144) coding protein psRNATarget