Search result

BaseInfo

ncRNA ID lus-miR167e
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UGAAGCUGCCAGCAUGAUCUA - NA
Stem-loop(if miRNA) U    ACUUC  C   U  G UC       --  G      U        C  GC       AAA  UCCUUUGAAAGGAAA
 GAGU     UC AUC AU G  CGUGGAG  CA CAGCAG UGAAGCUG CA  AUGAUCU   CU               A
 ||||     || ||| || |  |||||||  || |||||| |||||||| ||  |||||||   ||               A
 CUCA     AG UAG UA C  GCACUUC  GU GUUGUC ACUUUGAC GU  UACUAGA   UC               G
A    -CCAC  C   C  G UA       CU  A      C        A  -A       --G  UAGAAGGAAGAAGGA
Stem-loop sequence UGAGUACUUCUCCAUCUAUGGUCCGUGGAGCAGCAGCAGUUGAAGCUGCCAGCAUGAUCUAAACUUCCUUUGAAAGGAAAAAGAGGAAGAAGGAAGAUCUGAGAUCAUAUGACAGUUUCACCUGUUGAUGUCCUUCACGAUCGAUCGAUCGACACCACUCA

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).