ncRNA ID | novel_rco_miR109 |
Species | Ricinus communis |
Class | miRNA |
Genome position | NW_002994652.1:12395-12481 [+] |
Reference genome | JCVI_RCG_1.1 |
Source | SRR1027045 |
Length | 21 |
Mature sequence(if miRNA) | 67 - UUGAGCCGCGUCAAUAUCUCC - 87 |
Stem-loop(if miRNA) |
--             U       U   -   GA    -AA   U   AGGUAUUGGCGCG CUCAAUC GAU ACA  GCUA   UGG A   ||||||||||||| ||||||| ||| |||  ||||   ||| A   UCUAUAACUGCGC GAGUUAG UUA UGU  CGAU   AUU A CC             C       U   A   AC    AAG   U |
Stem-loop sequence | AGGUAUUGGCGCGUCUCAAUCUGAUACAGAGCUAAAUGGUAAAUUUAGAAUAGCCAUGUAAUUUGAUUGAGCCGCGUCAAUAUCUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_002511615.2 |
|
2.5 | PREDICTED: Ricinus communis scarecrow-like protein 6 (LOC8265856), mRNA | scarecrow-like protein 6(LOC8265856) | coding protein | psRNATarget | |||||||||
XM_015725220.1 |
|
2.5 | PREDICTED: Ricinus communis scarecrow-like protein 27 (LOC8265567), mRNA | scarecrow-like protein 27(LOC8265567) | coding protein | psRNATarget |