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BaseInfo

ncRNA ID novel_rco_miR106
Species Ricinus communis
Class miRNA
Genome position NW_002994603.1:128347-128435 [+]
Reference genome JCVI_RCG_1.1
Source SRR1027045
Length 20
Mature sequence(if miRNA) 1 - UUGGCAUUCUGUCCACCUCC - 20
Stem-loop(if miRNA) --       U   U         UAAAU -   GAUCACUUCUUG
  UUGGCAU CUG CCACCUCCA     C UAA            G
  ||||||| ||| |||||||||     | |||
  AACUGUA GAC GGUGGAGGU     C GGU            U
CA       C   C         UGUUU U   CUUUAUAACCUG
Stem-loop sequence UUGGCAUUCUGUCCACCUCCAUAAAUCUAAGAUCACUUCUUGGUGUCCAAUAUUUCUGGUCUUUGUUGGAGGUGGCCAGCAUGUCAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_002514857.2
ncRNA:20   CCUCCACCUGUCUUACGGUU   1
  ||||||*|||||||||||||
targets:1346   GGAGGUUGACAGAAUGCCAA   1365

1.0 PREDICTED: Ricinus communis F-box only protein 6 (LOC8286785), mRNA F-box only protein 6(LOC8286785) coding protein psRNATarget