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BaseInfo

ncRNA ID novel_rco_miR104
Species Ricinus communis
Class miRNA
Genome position NW_002994566.1:282971-283031 [-]
Reference genome JCVI_RCG_1.1
Source SRR1027045
Length 22
Mature sequence(if miRNA) 1 - UCAAUUUCUAGAUCUGGAGCAG - 22
Stem-loop(if miRNA) --  A  GA       --     -U     UG
  GC UU  AUCUAGA  UUGGG  UAGGA  U
  || ||  |||||||  |||||  |||||
  CG GG  UAGAUCU  AACUU  AUCCU  U
GA  A  UC       UU     UU     UG
Stem-loop sequence GCAUUGAAUCUAGAUUGGGUUAGGAUGUUGUUCCUAUUUUCAAUUUCUAGAUCUGGAGCAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015715533.1
ncRNA:22   GACGAGGUCUAGAUCUUUAACU   1
  =||**||*||||||||||||||
targets:1674   UUGAACCUGAUCUAGAAAUUGA   1695

3.0 PREDICTED: Ricinus communis sister chromatid cohesion 1 protein 3 (LOC8261128), transcript variant X2, mRNA sister chromatid cohesion 1 protein 3(LOC8261128) coding protein psRNATarget