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BaseInfo

ncRNA ID novel_rco_miR93
Species Ricinus communis
Class miRNA
Genome position NW_002994390.1:329856-329929 [-]
Reference genome JCVI_RCG_1.1
Source SRR1027045
Length 21
Mature sequence(if miRNA) 1 - UUUGGAAGGAGAGAAAGAUAG - 21
Stem-loop(if miRNA) --                           AUGACCUU
  AUCUUUUUCUCCUUCCAAACACAAGUU        G
  |||||||||||||||||||||||||||
  UAGAAAGAGAGGAAGGUUUGUGUUCAA        G
GA                           CAAUAUCA
Stem-loop sequence AUCUUUUUCUCCUUCCAAACACAAGUUAUGACCUUGGACUAUAACAACUUGUGUUUGGAAGGAGAGAAAGAUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_002529365.2
ncRNA:21   GAUAGAAAGAGAGGAAGGUUU   1
  =|||=|||||||*||||||||
targets:166   UUAUUUUUCUCUGCUUCCAAA   186

2.5 PREDICTED: Ricinus communis probable glucan 1,3-alpha-glucosidase (LOC8264848), mRNA probable glucan 1,3-alpha-glucosidase(LOC8264848) coding protein psRNATarget
XM_002512966.2
ncRNA:21   GAUAGAAAGAGAGGAAGGUUU   1
  |**||||||||||||*|||||
targets:358   CCCUCUUUCUCUCCUCCCAAA   378

2.5 PREDICTED: Ricinus communis amidophosphoribosyltransferase, chloroplastic (LOC8284389), mRNA amidophosphoribosyltransferase, chloroplastic(LOC8284389) coding protein psRNATarget