Search result

BaseInfo

ncRNA ID novel_rco_miR91
Species Ricinus communis
Class miRNA
Genome position NW_002994371.1:438311-438507 [-]
Reference genome JCVI_RCG_1.1
Source SRR1027045
Length 24
Mature sequence(if miRNA) 1 - ACGAGAAAUAUGAUAAUGAUGGCU - 24
Stem-loop(if miRNA) --            C   G              A   AG                   U   UC    A      CA        CAG    A  A   
  CCAUCAUUAUCA AUU CUUGUAUUUGAUAA AUG  UUUGGAGCUUAAUAACUCA AAU  UAUU UUUGAU  UUAAAUCG   UUUA GA GUCG
  |||||||||||| ||| |||||||||||||| |||  ||||||||||||||||||| |||  |||| ||||||  ||||||||   |||| || |||U
  GGUAGUAAUAGU UAA GAGCAUAAAUUAUU UAU  AAAUCUCGAAUUGUUGAGU UUA  AUAA AAACUG  AAUUUAGC   GAAU CU CAGU
UC            A   A              A   CU                   U   UA    C      AC        -UA    G  -   
Stem-loop sequence CCAUCAUUAUCACAUUGCUUGUAUUUGAUAAAAUGAGUUUGGAGCUUAAUAACUCAUAAUUCUAUUAUUUGAUCAUUAAAUCGCAGUUUAAGAAGUCGUUGACUCGUAAGAUCGAUUUAACAGUCAAACAAUAAUAUUUUGAGUUGUUAAGCUCUAAAUCUAUAUUAUUAAAUACGAGAAAUAUGAUAAUGAUGGCU