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BaseInfo

ncRNA ID novel_rco_miR90
Species Ricinus communis
Class miRNA
Genome position NW_002994370.1:144413-144489 [+]
Reference genome JCVI_RCG_1.1
Source SRR1027045
Length 21
Mature sequence(if miRNA) 1 - UAAAGCUGCCAGCAUGAUCUA - 21
Stem-loop(if miRNA) --UA         G          A  C       CCAU
    AAGCUGCCA CAUGAUCUAA UU UCUUUCU    C
    ||||||||| |||||||||| || |||||||
    UUCGAUGGU GUACUAGAUU GA AGGAAGA    A
CCAC         -          A  U       UAAA
Stem-loop sequence UAAAGCUGCCAGCAUGAUCUAAAUUCUCUUUCUCCAUCAAAAUAGAAGGAUAGAUUAGAUCAUGUGGUAGCUUCACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_002519327.2
ncRNA:21   AUCUAGUACGACCGUCGAAAU   1
  **|||*|||*|||||||||||
targets:3023   AUGAUGAUGAUGGCAGCUUUA   3043

2.5 PREDICTED: Ricinus communis putative disease resistance protein RGA1 (LOC8262630), mRNA putative disease resistance protein RGA1(LOC8262630) coding protein psRNATarget