ncRNA ID | novel_rco_miR90 |
Species | Ricinus communis |
Class | miRNA |
Genome position | NW_002994370.1:144413-144489 [+] |
Reference genome | JCVI_RCG_1.1 |
Source | SRR1027045 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UAAAGCUGCCAGCAUGAUCUA - 21 |
Stem-loop(if miRNA) |
--UA         G          A  C       CCAU     AAGCUGCCA CAUGAUCUAA UU UCUUUCU    C     ||||||||| |||||||||| || |||||||     UUCGAUGGU GUACUAGAUU GA AGGAAGA    A CCAC         -          A  U       UAAA |
Stem-loop sequence | UAAAGCUGCCAGCAUGAUCUAAAUUCUCUUUCUCCAUCAAAAUAGAAGGAUAGAUUAGAUCAUGUGGUAGCUUCACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_002519327.2 |
|
2.5 | PREDICTED: Ricinus communis putative disease resistance protein RGA1 (LOC8262630), mRNA | putative disease resistance protein RGA1(LOC8262630) | coding protein | psRNATarget |