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BaseInfo

ncRNA ID	novel_rco_miR87
Species	Ricinus communis
Class	miRNA
Genome position	NW_002994279.1:1242422-1242556 [+]
Reference genome	JCVI_RCG_1.1
Source	SRR1027045
Length	21
Mature sequence(if miRNA)	1 - AGAAGCAAGGAAAUGCUGCCA - 21
Stem-loop(if miRNA)	--A        G            A           -UGAUAAAAAG   A   AG     GCA  UAU    GAAGCAAG AAAUGCUGCCAG AACUGUGUAGC           GGC UGG  GUAUG   UC   A    |||||||| |||||||||||| |||||||||||           ||| |||  |||||   ||    CUUCGUUC UUUACGACGGUC UUGACACAUCG           CUG ACC  CAUGC   AG   A UGC        G            G           UUGGGACACAA   A   -A     -AG  UUC
Stem-loop sequence	AGAAGCAAGGAAAUGCUGCCAGAAACUGUGUAGCUGAUAAAAAGGGCAUGGAGGUAUGGCAUCUAUAACUUGAGACGUACACCAAGUCAACACAGGGUUGCUACACAGUUGCUGGCAGCAUUUGCUUGCUUCCGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015715599.1	ncRNA:21   ACCGUCGUAAAGGAACGAAGA   1   **||*||||||||||||||=| targets:434   CUGCUGCAUUUCCUUGCUUUU   454 Target Full Sequence	2.5	PREDICTED: Ricinus communis protein STRUBBELIG-RECEPTOR FAMILY 5 (LOC8259938), transcript variant X1, mRNA	protein STRUBBELIG-RECEPTOR FAMILY 5(LOC8259938)	coding protein	psRNATarget
XM_015725021.1	ncRNA:21   ACCGUCGUAAAGGAACGAAGA   1   |**|||||*|||||||||||| targets:586   UUUCAGCAGUUCCUUGCUUCU   606 Target Full Sequence	2.5	PREDICTED: Ricinus communis uncharacterized LOC107262007 (LOC107262007), mRNA	uncharacterized LOC107262007(LOC107262007)	coding protein	psRNATarget
XM_015725509.1	ncRNA:21   ACCGUCGUAAAGGAACGAAGA   1   |**|||||*|||||||||||| targets:271   UUUCAGCAGUUCCUUGCUUCU   291 Target Full Sequence	2.5	PREDICTED: Ricinus communis uncharacterized LOC107262065 (LOC107262065), mRNA	uncharacterized LOC107262065(LOC107262065)	coding protein	psRNATarget