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BaseInfo

ncRNA ID novel_rco_miR77
Species Ricinus communis
Class miRNA
Genome position NW_003009950.1:702-780 [+]
Reference genome JCVI_RCG_1.1
Source SRR1027044
Length 24
Mature sequence(if miRNA) 1 - AUACCUCUGGUGGAUCGUUCUGGU - 24
Stem-loop(if miRNA) --A     -    U    C     GGUAA  GUUUU     U
   UACCU CUGG GGAU GUUCU     UC     CUCGG G
   ||||| |||| |||| |||||     ||     |||||
   GUGGA GACU UCUA UAAGG     AG     GGGCU G
UUA     C    -    -     --AUA  AACUU     A
Stem-loop sequence AUACCUCUGGUGGAUCGUUCUGGUAAUCGUUUUCUCGGUGGAUCGGGUUCAAGAAUAGGAAUAUCUUCAGCAGGUGAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015721137.1
ncRNA:24   UGGUCUUGCUAGGUGGUCUCCAUA   1
  |||||||||||||||=||||||||
targets:1722   ACCAGAACGAUCCACUAGAGGUAU   1745

1.5 PREDICTED: Ricinus communis uncharacterized LOC107261488 (LOC107261488), mRNA uncharacterized LOC107261488(LOC107261488) coding protein psRNATarget