Search result

BaseInfo

ncRNA ID	novel_rco_miR76
Species	Ricinus communis
Class	miRNA
Genome position	NW_002995108.1:1383-1488 [+]
Reference genome	JCVI_RCG_1.1
Source	SRR1027044
Length	21
Mature sequence(if miRNA)	1 - UGGAGAAGCAGGGCACGUGCA - 21
Stem-loop(if miRNA)	--   A    CA         CAUU      -  AUG  UAAUUGAACAUACAU   UGG GAAG  GGGCACGUG    ACUAAC UC   CA               A   ||| ||||  |||||||||    |||||| ||   ||   ACC CUUC  CCCGUGUAC    UGAUUG AG   CG               C CU   C    UG         UUCU      G  -GU  UUCUUUUUACGCAUA
Stem-loop sequence	UGGAGAAGCAGGGCACGUGCAUUACUAACUCAUGCAUAAUUGAACAUACAUACAUACGCAUUUUUCUUGCUGGAGGUUAGUUCUUCAUGUGCCCGUCUUCCCCAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_002514690.2	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   **=|||||||||||||||||| targets:1040   CCUACGUGCCCUGCUUCUCCA   1060 Target Full Sequence	1.0	PREDICTED: Ricinus communis NAC domain-containing protein 100 (LOC8263409), mRNA	NAC domain-containing protein 100(LOC8263409)	coding protein	psRNATarget
XM_015725842.1	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   *|||*|||=|||||||||||| targets:676   AGCAAGUGUCCUGCUUCUCCA   696 Target Full Sequence	2.5	PREDICTED: Ricinus communis NAC domain-containing protein 21/22 (LOC8266284), transcript variant X2, mRNA	NAC domain-containing protein 21/22(LOC8266284)	coding protein	psRNATarget
XM_002529908.2	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   *|||*|||=|||||||||||| targets:682   AGCAAGUGUCCUGCUUCUCCA   702 Target Full Sequence	2.5	PREDICTED: Ricinus communis NAC domain-containing protein 21/22 (LOC8266284), transcript variant X1, mRNA	NAC domain-containing protein 21/22(LOC8266284)	coding protein	psRNATarget