ncRNA ID | novel_rco_miR73 |
Species | Ricinus communis |
Class | miRNA |
Genome position | NW_002994725.1:175568-175668 [+] |
Reference genome | JCVI_RCG_1.1 |
Source | SRR1027044 |
Length | 21 |
Mature sequence(if miRNA) | 81 - UGAUUGAGCCGUGCCAAUAUC - 101 |
Stem-loop(if miRNA) |
--       C       C     -    ---A   CUAU    UC  CU  U   UAUUGGC UGGUUCA UCAGA CAUG    AAC    CCCU  UC  GC U   ||||||| ||||||| ||||| ||||    |||    ||||  ||  || A   AUAACCG GCCGAGU AGUUU GUAU    UUG    GGGA  AG  CG U CU       U       U     U    AUCG   UUGU    UA  UC  U |
Stem-loop sequence | UAUUGGCCUGGUUCACUCAGACAUGAAACCUAUCCCUUCUCCUGCUUAUUGCCUGAAUAGGGUGUUGUUGCUAUAUGUUUUGAUUGAGCCGUGCCAAUAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_002511615.2 |
|
1.5 | PREDICTED: Ricinus communis scarecrow-like protein 6 (LOC8265856), mRNA | scarecrow-like protein 6(LOC8265856) | coding protein | psRNATarget | |||||||||
XM_015725220.1 |
|
1.5 | PREDICTED: Ricinus communis scarecrow-like protein 27 (LOC8265567), mRNA | scarecrow-like protein 27(LOC8265567) | coding protein | psRNATarget |