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BaseInfo

ncRNA ID novel_rco_miR59
Species Ricinus communis
Class miRNA
Genome position NW_002994278.1:1627856-1627934 [-]
Reference genome JCVI_RCG_1.1
Source SRR1027044;SRR1027045
Length 21
Mature sequence(if miRNA) 59 - UGAACUCUCCCCCUCAACGGC - 79
Stem-loop(if miRNA) --   A      C           ACUUCA  CU  U     G
  UGA CUCUCC CCUCAACGGCU      GC  UG CUGAA U
  ||| |||||| |||||||||||      ||  || |||||
  ACU GAGGGG GGAGUUGUUGA      CG  AC GACUU U
CG   G      U           ------  AU  -     A
Stem-loop sequence UGAACUCUCCCCCUCAACGGCUACUUCAGCCUUGUCUGAAGUUAUUCAGCAUAGCAGUUGUUGAGGUGGGGAGGUCAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_002519180.2
ncRNA:21   CGGCAACUCCCCCUCUCAAGU   1
  **|*||||||*||||||||||
targets:2734   AGCAUUGAGGAGGAGAGUUCA   2754

2.5 PREDICTED: Ricinus communis receptor-like protein kinase ANXUR1 (LOC8258816), mRNA receptor-like protein kinase ANXUR1(LOC8258816) coding protein psRNATarget