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BaseInfo

ncRNA ID	novel_rco_miR53
Species	Ricinus communis
Class	miRNA
Genome position	NW_002994405.1:181069-181130 [-]
Reference genome	JCVI_RCG_1.1
Source	SRR1027044;SRR1027045
Length	22
Mature sequence(if miRNA)	41 - UAAUGGUGGAAUUUUUAUGGCA - 62
Stem-loop(if miRNA)	--UAAU           UA   --CA   U  C       GGUGGAAUUUU  UGG    AUG UC U       |||||||||||  |||    ||| ||       CUAUCUUGAAG  ACC    UAC AG G UUGUCU           --   UUAA   C  A
Stem-loop sequence	UAAUGGUGGAAUUUUUAUGGCAAUGUUCCUGAGACCAUAAUUCCAGAAGUUCUAUCUCUGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015727229.1	ncRNA:22   ACGGUAUUUUUAAGGUGGUAAU   1   *|=|*|||=||||||||||||| targets:725   AGUCCUAAGAAUUCCACCAUUA   746 Target Full Sequence	2.0	PREDICTED: Ricinus communis UPF0481 protein At3g47200 (LOC8271863), transcript variant X3, mRNA	UPF0481 protein At3g47200(LOC8271863)	coding protein	psRNATarget
XM_002532146.2	ncRNA:22   ACGGUAUUUUUAAGGUGGUAAU   1   *|=|*|||=||||||||||||| targets:940   AGUCCUAAGAAUUCCACCAUUA   961 Target Full Sequence	2.0	PREDICTED: Ricinus communis UPF0481 protein At3g47200 (LOC8271863), transcript variant X2, mRNA	UPF0481 protein At3g47200(LOC8271863)	coding protein	psRNATarget
XM_015727228.1	ncRNA:22   ACGGUAUUUUUAAGGUGGUAAU   1   *|=|*|||=||||||||||||| targets:1506   AGUCCUAAGAAUUCCACCAUUA   1527 Target Full Sequence	2.0	PREDICTED: Ricinus communis UPF0481 protein At3g47200 (LOC8271863), transcript variant X1, mRNA	UPF0481 protein At3g47200(LOC8271863)	coding protein	psRNATarget