Search result

BaseInfo

ncRNA ID novel_rco_miR50
Species Ricinus communis
Class miRNA
Genome position NW_002994517.1:138760-138809 [+]
Reference genome JCVI_RCG_1.1
Source SRR3286334
Length 23
Mature sequence(if miRNA) 28 - AUUCCUUUUCUUGUGUCGAAGAC - 50
Stem-loop(if miRNA) --                   UG G
  UUUUGACACAAGAAAGGGA  U G
  |||||||||||||||||||  |
  GAAGCUGUGUUCUUUUCCU  A A
CA                   UA A
Stem-loop sequence UUUUGACACAAGAAAGGGAUGUGGAAAAUUCCUUUUCUUGUGUCGAAGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015727062.1
ncRNA:23   CAGAAGCUGUGUUCUUUUCCUUA   1
  **||*||=|*|||||||||||||
targets:416   AGCUACGGCUCAAGAAAAGGAAU   438

3.0 PREDICTED: Ricinus communis DNA repair protein RAD4 (LOC8272178), mRNA DNA repair protein RAD4(LOC8272178) coding protein psRNATarget