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BaseInfo

ncRNA ID	novel_rco_miR48
Species	Ricinus communis
Class	miRNA
Genome position	NW_002994441.1:355055-355252 [-]
Reference genome	JCVI_RCG_1.1
Source	SRR3286334
Length	21
Mature sequence(if miRNA)	1 - AGUAGUAUGAUAAUAAUGACU - 21
Stem-loop(if miRNA)	--    C            G   U  -CUG      C                      UAAUUUCA               -AUUACGAAU     AGU   UCAU AUUAUUAUAUUG UCG GU    AUAAUA GAGUUUAGAAUUUAACAAUUCA        UUAUUUAACCAUCAA          UCAGA   C   |||| |||||||||||| ||| ||    |||||| ||||||||||||||||||||||        |||||||||||||||          |||||   A   AGUA UAAUAGUAUGAU AGC CA    UAUUAU CUUAAAUUUUAAAUUGUUAAGU        AAUAAGUUGGUAGUU          AGUUU   C UC    A            G   -  AAAA      A                      UUCAUAAC               GAACUAGAAU     AAU
Stem-loop sequence	UCAUCAUUAUUAUAUUGGUCGUGUCUGAUAAUACGAGUUUAGAAUUUAACAAUUCAUAAUUUCAUUAUUUAACCAUCAAAUUACGAAUUCAGAAGUCACUAAUUUGAUAAGAUCAAGUUGAUGGUUGAAUAACAAUACUUUGAAUUGUUAAAUUUUAAAUUCAUAUUAUAAAAACCGAGUAGUAUGAUAAUAAUGACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_002514778.2	ncRNA:21   UCAGUAAUAAUAGUAUGAUGA   1   *||==||=||||||||||||| targets:1003   UGUUGUUGUUAUCAUACUACU   1023 Target Full Sequence	3.0	PREDICTED: Ricinus communis uncharacterized LOC8274266 (LOC8274266), mRNA	uncharacterized LOC8274266(LOC8274266)	coding protein	psRNATarget