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BaseInfo

ncRNA ID	novel_rco_miR46
Species	Ricinus communis
Class	miRNA
Genome position	NW_002994368.1:702405-702585 [+]
Reference genome	JCVI_RCG_1.1
Source	SRR3286334
Length	22
Mature sequence(if miRNA)	160 - CUUGGACUGAAGGGAGCUCCUU - 181
Stem-loop(if miRNA)	--A             C   CU      ---U     UAAAGGG  U   G     G   AC        U   G   U     -AC   G  AU    GAGCUUCCUUCAG CCA  CAUGGA    GGGGG       GC GAA UAUCU CCG  UCAUUCAU CAA CAC AGUAG   AAA GG  U    ||||||||||||| |||  ||||||    |||||       || ||| ||||| |||  |||||||| ||| ||| |||||   ||| ||  G    CUCGAGGGAAGUC GGU  GUGCCU    CUCCC       CG UUU AUAGA GGC  AGUAAGUA GUU GUG UCAUC   UUU UC  G UUC             A   UC      UUUU     -----UA  U   A     G   GU        U   A   -     GAU   G  AU
Stem-loop sequence	AGAGCUUCCUUCAGCCCACUCAUGGAUGGGGGUAAAGGGGCUGAAGUAUCUGCCGACUCAUUCAUUCAAGCACUAGUAGACAAAGGGAUUGGUACUGUUUUAGCUACUGUGAUUGUAUGAAUGAUGCGGGAGAUAAUUUUGCAUCCCUCUUUUUCCGUGCUUGGACUGAAGGGAGCUCCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_002525092.2	ncRNA:22   UUCCUCGAGGGAAGUCAGGUUC   1   =|||=|*||||||||||||||* targets:1236   GAGGGGAUCCCUUCAGUCCAAU   1257 Target Full Sequence	3.0	PREDICTED: Ricinus communis transcription factor TCP4 (LOC8264223), mRNA	transcription factor TCP4(LOC8264223)	coding protein	psRNATarget