ncRNA ID | novel_rco_miR42 |
Species | Ricinus communis |
Class | miRNA |
Genome position | NW_002994278.1:2233797-2233870 [-] |
Reference genome | JCVI_RCG_1.1 |
Source | SRR3286333 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGAUUGAGCCGUGCCAAUAUC - 21 |
Stem-loop(if miRNA) |
--      A            A  C   UCU     A   UGUUGG AUGGCUCAAUCA AU AAA   CCCAA G   |||||| |||||||||||| || |||   |||||   AUAACC UGCCGAGUUAGU UA UUU   GGGUU U CU      G            C  A   CCU     U |
Stem-loop sequence | UGUUGGAAUGGCUCAAUCAAAUCAAAUCUCCCAAAGUUUUGGGUCCUUUAAUCUGAUUGAGCCGUGCCAAUAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_002511615.2 |
|
1.5 | PREDICTED: Ricinus communis scarecrow-like protein 6 (LOC8265856), mRNA | scarecrow-like protein 6(LOC8265856) | coding protein | psRNATarget | |||||||||
XM_015725220.1 |
|
1.5 | PREDICTED: Ricinus communis scarecrow-like protein 27 (LOC8265567), mRNA | scarecrow-like protein 27(LOC8265567) | coding protein | psRNATarget |