ncRNA ID | novel_rco_miR35 |
Species | Ricinus communis |
Class | miRNA |
Genome position | NW_002994287.1:665112-665186 [-] |
Reference genome | JCVI_RCG_1.1 |
Source | SRR3286333;SRR3286334 |
Length | 20 |
Mature sequence(if miRNA) | 1 - CAAAUAAAAGUACAAGGACU - 20 |
Stem-loop(if miRNA) |
--C                U      G  U     CCC    UCUUGUAUUUUUAUUU UGUUUU AU AAGGA   A    |||||||||||||||| |||||| || |||||    GGAACAUGAAAAUAAA ACGAAA UA UUCCU   A UCA                C      G  -     AAU |
Stem-loop sequence | CUCUUGUAUUUUUAUUUUUGUUUUGAUUAAGGACCCAAUAAUCCUUAUGAAAGCACAAAUAAAAGUACAAGGACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015721505.1 |
|
3.0 | PREDICTED: Ricinus communis putative F-box/FBD/LRR-repeat protein At4g03220 (LOC8266924), mRNA | putative F-box/FBD/LRR-repeat protein At4g03220(LOC8266924) | coding protein | psRNATarget |