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BaseInfo

ncRNA ID lus-miR166h
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UCGGACCAGGCUUCAUUCCCC - NA
Stem-loop(if miRNA)        AA   -A  ---------CU       UUUUAAUAU UU   A        UU      CU     C     UU   --AAUG     UGA
GAAUCGU  AGA  GG           GGGAGCU         C  UUG GGGGAAUG  GUCUGG  CGAAG CGCUA  AAC      GCCGA   G
|||||||  |||  ||           |||||||         |  ||| ||||||||  ||||||  ||||| |||||  |||      |||||
CUUAGCA  UCU  CC           CCCUUGA         G  AAC CCCCUUAC  CGGACC  GCUUC GCGAU  UUG      CGGCU   A
       GG   AG  CUUAUUAAUCU       CCUCGUUUC UU   C        UU      AG     A     --   GAUAGA     UAA
Stem-loop sequence GAAUCGUAAAGAAGGCUGGGAGCUUUUUAAUAUCUUUUGAGGGGAAUGUUGUCUGGCUCGAAGCCGCUAUUAACAAUGGCCGAUGAGAAAUUCGGCAGAUAGGUUUAGCGACUUCGGACCAGGCUUCAUUCCCCCCAAUUGCUUUGCUCCAGUUCCCUCUAAUUAUUCCCGAUCUGGACGAUUC

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).