ncRNA ID | novel_rco_miR27 |
Species | Ricinus communis |
Class | miRNA |
Genome position | NW_002994429.1:70626-70754 [+] |
Reference genome | JCVI_RCG_1.1 |
Source | SRR3286332;SRR3286334;SRR1027044 |
Length | 20 |
Mature sequence(if miRNA) | 110 - GGUAGUUCGAUCGUGAAAUU - 129 |
Stem-loop(if miRNA) |
--      UA  -    AUC    ---U        UU ACAAUAACC        CU   U    AAU   UUUUAC  GA CGGA   UCAA    GAAUUAGA  U         GCUAAGUC  AGU UUUC   A   ||||||  || ||||   ||||    ||||||||  |         ||||||||  ||| ||||   C   AAAGUG  CU GCUU   GGUU    CUUAGUUU  A         UGGUUCGG  UUA GAAG   A UU      --  A    GAU    UUAU        UU ----GACUC        UU   C    AAA |
Stem-loop sequence | UUUUACUAGACGGAAUCUCAAUGAAUUAGAUUUACAAUAACCGCUAAGUCCUAGUUUUUCAAUACAAAAGAAGCAUUUUGGCUUGGUCUCAGAUUUUUGAUUCUAUUUUGGUAGUUCGAUCGUGAAAUU |