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BaseInfo

ncRNA ID novel_rco_miR27
Species Ricinus communis
Class miRNA
Genome position NW_002994429.1:70626-70754 [+]
Reference genome JCVI_RCG_1.1
Source SRR3286332;SRR3286334;SRR1027044
Length 20
Mature sequence(if miRNA) 110 - GGUAGUUCGAUCGUGAAAUU - 129
Stem-loop(if miRNA) --      UA  -    AUC    ---U        UU ACAAUAACC        CU   U    AAU
  UUUUAC  GA CGGA   UCAA    GAAUUAGA  U         GCUAAGUC  AGU UUUC   A
  ||||||  || ||||   ||||    ||||||||  |         ||||||||  ||| ||||   C
  AAAGUG  CU GCUU   GGUU    CUUAGUUU  A         UGGUUCGG  UUA GAAG   A
UU      --  A    GAU    UUAU        UU ----GACUC        UU   C    AAA
Stem-loop sequence UUUUACUAGACGGAAUCUCAAUGAAUUAGAUUUACAAUAACCGCUAAGUCCUAGUUUUUCAAUACAAAAGAAGCAUUUUGGCUUGGUCUCAGAUUUUUGAUUCUAUUUUGGUAGUUCGAUCGUGAAAUU