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BaseInfo

ncRNA ID novel_rco_miR25
Species Ricinus communis
Class miRNA
Genome position NW_002994353.1:136647-136723 [-]
Reference genome JCVI_RCG_1.1
Source SRR3286332;SRR3286335
Length 21
Mature sequence(if miRNA) 1 - CUGAAGUGUUUGGGGGAACUC - 21
Stem-loop(if miRNA) --       UG C       U         UU    AAG
  GUUCCCU  A CACUUCA UGUGGAUUA  CUUC   C
  |||||||  | ||||||| |||||||||  ||||
  CAAGGGG  U GUGAAGU ACAUUUGGU  GAGG   U
CU       GU U       C         -U    AAC
Stem-loop sequence GUUCCCUUGACCACUUCAUUGUGGAUUAUUCUUCAAGCUCAAGGAGUUGGUUUACACUGAAGUGUUUGGGGGAACUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015725247.1
ncRNA:21   CUCAAGGGGGUUUGUGAAGUC   1
  ***|||||||||||||||||*
targets:368   NNNUUCCCCCAAACACUUCAA   388

2.0 PREDICTED: Ricinus communis low affinity sulfate transporter 3 (LOC8265600), mRNA low affinity sulfate transporter 3(LOC8265600) coding protein psRNATarget