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BaseInfo

ncRNA ID novel_rco_miR24
Species Ricinus communis
Class miRNA
Genome position NW_002994332.1:404404-404478 [+]
Reference genome JCVI_RCG_1.1
Source SRR3286332;SRR3286333
Length 21
Mature sequence(if miRNA) 55 - UGAUUGAGCCGUGCCAAUAUC - 75
Stem-loop(if miRNA) --      UG             G U  -UU      U
  UAUUGG  CGGUUCAAUCAGA A CA   GCUCUA A
  ||||||  ||||||||||||| | ||   ||||||
  AUAACC  GCCGAGUUAGUUU U GU   CGAGAU U
CU      GU             G U  UUU      A
Stem-loop sequence UAUUGGUGCGGUUCAAUCAGAGAUCAUUGCUCUAUAUAUAGAGCUUUUGUUGUUUGAUUGAGCCGUGCCAAUAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_002511615.2
ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1
  |||||||||=|||||||||||
targets:1722   GAUAUUGGCGCGGCUCAAUCA   1742

1.5 PREDICTED: Ricinus communis scarecrow-like protein 6 (LOC8265856), mRNA scarecrow-like protein 6(LOC8265856) coding protein psRNATarget
XM_015725220.1
ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1
  |||||||||=|||||||||||
targets:2152   GAUAUUGGCGCGGCUCAAUCA   2172

1.5 PREDICTED: Ricinus communis scarecrow-like protein 27 (LOC8265567), mRNA scarecrow-like protein 27(LOC8265567) coding protein psRNATarget