ncRNA ID | novel_rco_miR24 |
Species | Ricinus communis |
Class | miRNA |
Genome position | NW_002994332.1:404404-404478 [+] |
Reference genome | JCVI_RCG_1.1 |
Source | SRR3286332;SRR3286333 |
Length | 21 |
Mature sequence(if miRNA) | 55 - UGAUUGAGCCGUGCCAAUAUC - 75 |
Stem-loop(if miRNA) |
--      UG             G U  -UU      U   UAUUGG  CGGUUCAAUCAGA A CA   GCUCUA A   ||||||  ||||||||||||| | ||   ||||||   AUAACC  GCCGAGUUAGUUU U GU   CGAGAU U CU      GU             G U  UUU      A |
Stem-loop sequence | UAUUGGUGCGGUUCAAUCAGAGAUCAUUGCUCUAUAUAUAGAGCUUUUGUUGUUUGAUUGAGCCGUGCCAAUAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_002511615.2 |
|
1.5 | PREDICTED: Ricinus communis scarecrow-like protein 6 (LOC8265856), mRNA | scarecrow-like protein 6(LOC8265856) | coding protein | psRNATarget | |||||||||
XM_015725220.1 |
|
1.5 | PREDICTED: Ricinus communis scarecrow-like protein 27 (LOC8265567), mRNA | scarecrow-like protein 27(LOC8265567) | coding protein | psRNATarget |