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BaseInfo

ncRNA ID	novel_rco_miR23
Species	Ricinus communis
Class	miRNA
Genome position	NW_002994278.1:464931-465013 [+]
Reference genome	JCVI_RCG_1.1
Source	SRR3286332;SRR3286333
Length	21
Mature sequence(if miRNA)	63 - UGCCAAAGGAGAGUUGCCCUG - 83
Stem-loop(if miRNA)	--     C     GC           ----AG    CAC  GC   GGGCA CUCUU  UUGGCAGGUAA      GGGA   UA  U   ||||| |||||  |||||||||||      ||||   ||  A   CCCGU GAGAG  AACCGUUCGUU      CCCU   AU  G GU     U     GA           CAAUAA    ACA  AC
Stem-loop sequence	GGGCACCUCUUGCUUGGCAGGUAAAGGGGACACUAGCUAGCAUAACAUCCCAAUAACUUGCUUGCCAAAGGAGAGUUGCCCUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015719136.1	ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1   =|||||||*|||||||||||| targets:1100   UAGGGCAAAUCUCCUUUGGCA   1120 Target Full Sequence	1.5	PREDICTED: Ricinus communis probable ubiquitin-conjugating enzyme E2 24 (LOC8279507), transcript variant X2, mRNA	probable ubiquitin-conjugating enzyme E2 24(LOC8279507)	coding protein	psRNATarget
XM_015719136.1	ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1   |*||||||*|||||||||||| targets:1007   CUGGGCAAAUCUCCUUUGGCA   1027 Target Full Sequence	1.5	PREDICTED: Ricinus communis probable ubiquitin-conjugating enzyme E2 24 (LOC8279507), transcript variant X2, mRNA	probable ubiquitin-conjugating enzyme E2 24(LOC8279507)	coding protein	psRNATarget
XM_015719136.1	ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1   =*||||||*|||||||||||| targets:739   UUGGGCAAAUCUCCUUUGGCA   759 Target Full Sequence	1.5	PREDICTED: Ricinus communis probable ubiquitin-conjugating enzyme E2 24 (LOC8279507), transcript variant X2, mRNA	probable ubiquitin-conjugating enzyme E2 24(LOC8279507)	coding protein	psRNATarget
XM_002519020.2	ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1   =|||||||*|||||||||||| targets:1099   UAGGGCAAAUCUCCUUUGGCA   1119 Target Full Sequence	1.5	PREDICTED: Ricinus communis probable ubiquitin-conjugating enzyme E2 24 (LOC8279507), transcript variant X1, mRNA	probable ubiquitin-conjugating enzyme E2 24(LOC8279507)	coding protein	psRNATarget
XM_002519020.2	ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1   |*||||||*|||||||||||| targets:1006   CUGGGCAAAUCUCCUUUGGCA   1026 Target Full Sequence	1.5	PREDICTED: Ricinus communis probable ubiquitin-conjugating enzyme E2 24 (LOC8279507), transcript variant X1, mRNA	probable ubiquitin-conjugating enzyme E2 24(LOC8279507)	coding protein	psRNATarget
XM_002519020.2	ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1   =*||||||*|||||||||||| targets:738   UUGGGCAAAUCUCCUUUGGCA   758 Target Full Sequence	1.5	PREDICTED: Ricinus communis probable ubiquitin-conjugating enzyme E2 24 (LOC8279507), transcript variant X1, mRNA	probable ubiquitin-conjugating enzyme E2 24(LOC8279507)	coding protein	psRNATarget